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replay_trajectory_classification 1.4.1 documentation

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replay_trajectory_classification.classifier
- replay_trajectory_classification.classifier.ClusterlessClassifier
- replay_trajectory_classification.classifier.SortedSpikesClassifier
replay_trajectory_classification.clusterless_simulation
replay_trajectory_classification.continuous_state_transitions
replay_trajectory_classification.core
replay_trajectory_classification.decoder
- replay_trajectory_classification.decoder.ClusterlessDecoder
- replay_trajectory_classification.decoder.SortedSpikesDecoder
replay_trajectory_classification.discrete_state_transitions
replay_trajectory_classification.environments
replay_trajectory_classification.initial_conditions
- replay_trajectory_classification.initial_conditions.UniformInitialConditions
- replay_trajectory_classification.initial_conditions.UniformOneEnvironmentInitialConditions
replay_trajectory_classification.observation_model
- replay_trajectory_classification.observation_model.ObservationModel
replay_trajectory_classification.simulate
replay_trajectory_classification.sorted_spikes_simulation
replay_trajectory_classification.standard_decoder
replay_trajectory_classification.likelihoods.calcium_likelihood
replay_trajectory_classification.likelihoods.diffusion
- replay_trajectory_classification.likelihoods.diffusion.estimate_diffusion_position_density
- replay_trajectory_classification.likelihoods.diffusion.estimate_diffusion_position_distance
replay_trajectory_classification.likelihoods.multiunit_likelihood
replay_trajectory_classification.likelihoods.multiunit_likelihood_gpu
- replay_trajectory_classification.likelihoods.multiunit_likelihood_gpu.estimate_multiunit_likelihood_gpu
- replay_trajectory_classification.likelihoods.multiunit_likelihood_gpu.fit_multiunit_likelihood_gpu
replay_trajectory_classification.likelihoods.multiunit_likelihood_integer
replay_trajectory_classification.likelihoods.multiunit_likelihood_integer_gpu
- replay_trajectory_classification.likelihoods.multiunit_likelihood_integer_gpu.estimate_multiunit_likelihood_integer_gpu
- replay_trajectory_classification.likelihoods.multiunit_likelihood_integer_gpu.fit_multiunit_likelihood_integer_gpu
replay_trajectory_classification.likelihoods.spiking_likelihood_glm
replay_trajectory_classification.likelihoods.spiking_likelihood_kde
replay_trajectory_classification.likelihoods.spiking_likelihood_kde_gpu
- replay_trajectory_classification.likelihoods.spiking_likelihood_kde_gpu.estimate_place_fields_kde_gpu
- replay_trajectory_classification.likelihoods.spiking_likelihood_kde_gpu.estimate_spiking_likelihood_kde_gpu

API Reference
replay_trajectory_classification.standard_decoder
replay_trajectory_classification.standard_decoder.isotonic_regression

replay_trajectory_classification.standard_decoder.isotonic_regression#

isotonic_regression(posterior, time, place_bin_centers)[source]#

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replay_trajectory_classification.standard_decoder.linear_regression

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